Cy5 Picolyl Azide

Cy5 Picolyl Azide is an advanced fluorescent probe that incorporates a copper-chelating motif to raise the effective concentration of Cu(I) at the reaction site to boost the efficiency of the CuAAC reaction, resulting in a faster and more biocompatible CuAAC labeling. Up to 40-fold increase of signal intensity, compared to conventional azides, was reported (see Selected References).

In addition, the use picolyl azides instead of conventional azides allows for at least a tenfold reduction in the concentration of the copper catalyst without sacrificing the efficiency of labeling, significantly improving biocompatibility of CuAAC labeling protocol.

In summary, the introduction of a copper-chelating motif into azide probe leads to a substantial increase in the sensitivity and reduced cell toxicity of CuAAC detection alkyne-tagged biomolecules. This will be of special value for the detection of low abundance targets or living system imaging.

Cy5 Picolyl Azide is a water-soluble, pH-insensitive from pH 4 to pH 10, far-red-fluorescent probe with excitation ideally suited for the 633 nm or 647 nm laser lines. Cy5 dye is structurally similar, and spectrally is almost identical to Alexa Fluor® 647, CF® 647 Dye, or any other Cyanine5 based fluorescent dyes.

Price range: $198.00 through $1,737.00

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SKU: CCT-1177
CAS Number
N/A
Molecular Weight
1155.5
Molecular Formula
C55H82N10O11S3
Appearance
Blue solid
Chemical Formula
C55H82N10O11S3
Extinction Coefficient
250,000
Purity
>95% (HPLC)
Unit Size
1 mg, 5 mg, 25 mg
Solubility
Water, DMSO, DMF
Storage Instructions
-20°C. Desiccate
Spectrally Similar Dyes
Alexa Fluor® 647, CF® 647, DyLight® 649
Laser Line
633 nm or 647 nm
Excitation/Emission Maximum
647 nm / 663 nm
Shipping Conditions
Ambient temperature
Shipping Instructions
Ambient temperature
Selected References

1. Jiang, H., et al. (2014). Monitoring Dynamic Glycosylation in Vivo Using Supersensitive Click Chemistry. Bioconjugate Chem.,, 25, 698-706. [PubMed]

2. Uttamapinant, C., et al. (2012). Fast, Cell-Compatible Click Chemistry with Copper-Chelating Azides for Biomolecular Labeling. Angew. Chem. Int. Ed,., 51, 5852-56. [PubMed]

3. Gaebler, A.,et al. (2016). A highly sensitive protocol for microscopy of alkyne lipids and fluorescently tagged or immunostained proteins. J. Lipid. Res., 57, 1934-47. [PubMed]

4. Knutson, S.D.,et al. (2020). Chemical Profiling of A‐to‐I RNA Editing Using a Click‐Compatible Phenylacrylamide Chem. Eur.J., 26, 9874-78. [PubMed]